STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0983KEGG: mca:MCA0478 allophanate hydrolase, subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1. (228 aa)    
Predicted Functional Partners:
Bsel_0985
KEGG: dat:HRM2_46550 putative allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2.
 
 0.999
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.998
Bsel_0986
KEGG: swp:swp_1150 VanZ like protein.
       0.773
Bsel_0987
PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: afw:Anae109_4370 threonyl/alanyl tRNA synthetase SAD.
       0.661
Bsel_0982
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rlg:Rleg_5712 xylose isomerase domain protein TIM barrel.
       0.595
Bsel_0626
DNA-(apurinic or apyrimidinic site) lyase; KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; Belongs to the FPG family.
 
    
 0.410
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.