STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0989PFAM: protein of unknown function DUF520; KEGG: gsu:GSU3204 putative nucleotide-binding protein; Belongs to the UPF0234 family. (163 aa)    
Predicted Functional Partners:
Bsel_0990
Peptidase M14 carboxypeptidase A; KEGG: GH14882 gene product from transcript GH14882-RA; PFAM: peptidase M14 carboxypeptidase A; protein of unknown function DUF1058; SMART: peptidase M14 carboxypeptidase A.
       0.586
Bsel_0988
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR.
       0.478
Bsel_1739
KEGG: nis:NIS_0622 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.437
Bsel_0991
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; nucleic acid binding OB-fold tRNA/helicase-type; Endonuclease/exonuclease/phosphatase; KEGG: scl:sce0688 endonuclease/exonuclease/phosphatase family protein.
       0.405
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.