STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0992PFAM: S-layer domain protein; KEGG: hypothetical protein. (229 aa)    
Predicted Functional Partners:
Bsel_3066
KEGG: scl:sce2259 hypothetical protein; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase.
  
     0.771
Bsel_1015
KEGG: xcb:XC_4140 hypothetical protein.
  
     0.551
Bsel_3063
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
  
     0.545
Bsel_0991
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; nucleic acid binding OB-fold tRNA/helicase-type; Endonuclease/exonuclease/phosphatase; KEGG: scl:sce0688 endonuclease/exonuclease/phosphatase family protein.
 
    
0.497
Bsel_0990
Peptidase M14 carboxypeptidase A; KEGG: GH14882 gene product from transcript GH14882-RA; PFAM: peptidase M14 carboxypeptidase A; protein of unknown function DUF1058; SMART: peptidase M14 carboxypeptidase A.
 
     0.443
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.