STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1002PFAM: DoxX family protein; KEGG: bvi:Bcep1808_5405 hypothetical protein. (169 aa)    
Predicted Functional Partners:
Bsel_2866
KEGG: pfl:PFL_0553 fused rhodanese domain-containing protein/phosphatidylserine decarboxylase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
 
  0.902
Bsel_3279
Rhodanese domain protein; KEGG: vpa:VP1200 putative thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
 
  0.902
Bsel_2450
PFAM: DoxX family protein; KEGG: bgl:bglu_2g01230 hypothetical protein.
  
  
 
0.901
Bsel_1476
Trimethylamine-N-oxide reductase (cytochrome c); KEGG: dde:Dde_0682 hypothetical protein; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
Bsel_2296
KEGG: nmu:Nmul_A1629 putative transcriptional regulator.
  
    0.591
Bsel_0371
Putative transmembrane anti-sigma factor; KEGG: plu:plu3506 hypothetical protein.
 
   
 0.505
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.