Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bsel_1021 | Bsel_1022 | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | Hypothetical protein. | 0.542 |
Bsel_1021 | Bsel_1023 | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | KEGG: dps:DP0280 competence protein F. | 0.849 |
Bsel_1021 | Bsel_1024 | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | Hypothetical protein. | 0.498 |
Bsel_1022 | Bsel_1021 | Hypothetical protein. | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | 0.542 |
Bsel_1022 | Bsel_1023 | Hypothetical protein. | KEGG: dps:DP0280 competence protein F. | 0.773 |
Bsel_1022 | Bsel_1024 | Hypothetical protein. | Hypothetical protein. | 0.563 |
Bsel_1023 | Bsel_1021 | KEGG: dps:DP0280 competence protein F. | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | 0.849 |
Bsel_1023 | Bsel_1022 | KEGG: dps:DP0280 competence protein F. | Hypothetical protein. | 0.773 |
Bsel_1023 | Bsel_1024 | KEGG: dps:DP0280 competence protein F. | Hypothetical protein. | 0.661 |
Bsel_1024 | Bsel_1021 | Hypothetical protein. | Helicase domain protein; KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. | 0.498 |
Bsel_1024 | Bsel_1022 | Hypothetical protein. | Hypothetical protein. | 0.563 |
Bsel_1024 | Bsel_1023 | Hypothetical protein. | KEGG: dps:DP0280 competence protein F. | 0.661 |