STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1069Alpha amylase catalytic region; KEGG: vfi:VF_2049 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (590 aa)    
Predicted Functional Partners:
Bsel_1254
TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: fph:Fphi_0329 pullulonase, type I; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
0.965
Bsel_2056
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase.
 
 
 0.958
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.955
Bsel_1249
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.945
Bsel_1890
KEGG: acp:A2cp1_4280 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
0.936
Bsel_2806
KEGG: tau:Tola_1232 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
0.935
Bsel_3266
KEGG: hypothetical protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
   
 0.906
Bsel_1507
PFAM: extracellular solute-binding protein family 1; KEGG: asa:ASA_2382 ABC-type maltose/maltodextrin transporter, periplasmic binding protein.
 
  
 0.862
Bsel_1509
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2380 ABC-type maltose/maltodextrin transporter, permease protein.
 
  
 0.799
Bsel_2057
KEGG: pmr:PMI0289 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
 
  
 0.707
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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