STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1083Carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: aeh:Mlg_2568 C-terminal processing peptidase-3; PFAM: peptidase S41; Peptidoglycan-binding domain 1 protein; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family. (496 aa)    
Predicted Functional Partners:
Bsel_1082
PFAM: Peptidase M23; KEGG: pen:PSEEN0379 M23/M37 family metalloendopeptidase.
 
 
 
 0.701
Bsel_1081
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.645
Bsel_1084
KEGG: hypothetical protein.
 
   
 0.633
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
  
 
 0.591
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     0.583
Bsel_1781
TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: tgr:Tgr7_1166 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein.
 
  
 0.549
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.510
Bsel_1649
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; KEGG: sat:SYN_01739 division specific D,D-transpeptidase / cell division protein; SMART: PASTA domain containing protein.
 
 
 0.496
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
     
 0.461
pheT
KEGG: sat:SYN_01723 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
   
 
 0.460
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.