STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1105KEGG: pca:Pcar_0114 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (319 aa)    
Predicted Functional Partners:
Bsel_3315
KEGG: gur:Gura_2313 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V.
 
 
  0.922
Bsel_1397
Thioredoxin; KEGG: prw:PsycPRwf_2309 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
 
 0.916
Bsel_1155
KEGG: mxa:MXAN_1156 cysteine desulfurase SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.912
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.906
Bsel_2028
TIGRFAM: methionine gamma-lyase; KEGG: ilo:IL0726 methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase.
   
 
 0.903
cysS
TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gme:Gmet_0057 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.554
Bsel_0389
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.488
Bsel_0721
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.488
Bsel_2399
KEGG: 2-cys peroxiredoxin, chloroplast, putative; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein.
  
 
 0.488
Bsel_0244
KEGG: prw:PsycPRwf_0086 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.468
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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