STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1200KEGG: psa:PST_2084 hypothetical protein. (237 aa)    
Predicted Functional Partners:
Bsel_1009
PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
     0.708
Bsel_0848
KEGG: abu:Abu_2143 hypothetical protein.
  
     0.620
Bsel_2248
Hypothetical protein.
  
     0.611
Bsel_0996
PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_2931 hypothetical protein.
  
     0.598
Bsel_0894
KEGG: psa:PST_0474 hypothetical protein.
  
     0.551
Bsel_0216
Hypothetical protein; KEGG: sfr:Sfri_1781 UspA domain-containing protein.
  
     0.480
Bsel_1201
KEGG: yen:YE0588 putative cation-transporting P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase.
 
     0.454
Bsel_2492
Integral membrane sensor signal transduction histidine kinase; KEGG: abo:ABO_0713 sensor histidine kinase RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.454
Bsel_2231
PFAM: cyclase/dehydrase; KEGG: afw:Anae109_0807 cyclase/dehydrase.
  
     0.448
Bsel_1985
PFAM: protein of unknown function DUF939; KEGG: dma:DMR_35100 hypothetical membrane protein.
  
     0.437
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.