STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1306Hypothetical protein. (40 aa)    
Predicted Functional Partners:
Bsel_1307
Hypothetical protein.
       0.773
Bsel_1308
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
       0.661
Bsel_1305
KEGG: dvm:DvMF_2385 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552; Belongs to the cytochrome c-552 family.
       0.610
Bsel_1309
PFAM: cytochrome c assembly protein; KEGG: scl:sce8173 cytochrome c-type biogenesis protein.
       0.577
Bsel_1310
Hypothetical protein; Possible subunit of a heme lyase.
       0.577
Bsel_1304
Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit-like protein; KEGG: dvm:DvMF_1491 cytochrome c nitrite reductase small subunit.
       0.531
Bsel_1311
Hypothetical protein; KEGG: maq:Maqu_1952 TPR repeat-containing protein.
       0.490
Bsel_1312
Hypothetical protein.
       0.490
Bsel_1313
TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: spl:Spea_0487 ABC transporter related; SMART: AAA ATPase.
       0.467
Bsel_1314
PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: mxa:MXAN_3257 heme exporter protein CcmB.
       0.467
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.