STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1341Putative signal transduction protein with CBS and DRTGG domains; KEGG: scl:sce0443 chloride channel; PFAM: DRTGG domain protein; CBS domain containing protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: CBS domain containing protein. (435 aa)    
Predicted Functional Partners:
Bsel_1633
PFAM: Uncharacterised protein family UPF0298.
 
     0.575
Bsel_1430
PFAM: Cell wall-active antibiotics response protein.
  
     0.543
Bsel_1340
Hypothetical protein.
       0.500
Bsel_2371
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.487
Bsel_1431
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dma:DMR_14190 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein.
  
     0.483
Bsel_1432
KEGG: sml:Smlt1255 putative two-component response regulator transcriptional regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
  
     0.452
Bsel_0293
Two component transcriptional regulator, LuxR family; KEGG: apj:APJL_0059 nitrate/nitrite response regulator protein; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver.
  
     0.431
Bsel_1553
PFAM: adenylate cyclase.
  
     0.430
Bsel_1112
PFAM: putative sugar-binding domain protein; KEGG: smd:Smed_3131 DeoR family transcriptional regulator.
 
     0.427
Bsel_1632
PFAM: protein of unknown function DUF1333; KEGG: GM19576 gene product from transcript GM19576-RA; Belongs to the UPF0342 family.
 
     0.417
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.