STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1433PFAM: RimK domain protein ATP-grasp; KEGG: apa:APP7_0562 ribosomal protein S6 modification protein. (291 aa)    
Predicted Functional Partners:
Bsel_1434
alpha-L-glutamate ligase, RimK family; KEGG: hap:HAPS_0258 ribosomal protein S6 modification protein, glutamic acid ligase; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; Belongs to the RimK family.
 
    
0.858
Bsel_1435
TIGRFAM: FolC bifunctional protein; KEGG: mxa:MXAN_2705 tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein.
       0.587
Bsel_0708
D-alanine--D-alanine ligase domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
  
 0.458
Bsel_0665
KEGG: hypothetical protein.
  
     0.438
Bsel_1436
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: lpf:lpl0283 hypothetical protein; SMART: GGDEF domain containing protein; GAF domain protein.
       0.401
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.