STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1502Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RSc1377 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Bsel_1074
PTS system, glucose-specific IIBC subunit; KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.562
Bsel_1501
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: pca:Pcar_2387 hypothetical protein; PFAM: Radical SAM domain protein.
       0.550
Bsel_0505
KEGG: asa:ASA_2992 PTS system, sucrose-specific IIBC component; TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.505
Bsel_2511
KEGG: pfl:PFL_4934 PTS system, trehalose-specific IIBC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.505
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    0.502
Bsel_0931
KEGG: vpa:VPA1424 PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
     
 0.500
Bsel_3097
PFAM: Auxin Efflux Carrier; KEGG: gem:GM21_2895 auxin efflux carrier.
  
     0.471
Bsel_0513
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hypothetical protein.
 
     0.438
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.