STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1545PFAM: GCN5-related N-acetyltransferase; KEGG: tdn:Suden_0790 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Bsel_2504
Putative NADH-flavin reductase-like protein; KEGG: bpt:Bpet0022 hypothetical protein.
   
    0.682
Bsel_0391
Hypothetical protein.
  
     0.673
Bsel_1600
PFAM: Cell-wall binding lipoprotein YkyA, putative; KEGG: viral A-type inclusion protein.
 
     0.658
Bsel_1270
KEGG: hypothetical protein.
  
    0.632
Bsel_1374
PFAM: SNARE associated Golgi protein; KEGG: lpc:LPC_2706 hypothetical protein.
  
     0.620
Bsel_1544
Conserved hypothetical protein; KEGG: afr:AFE_2171 GTP-binding protein.
 
     0.609
Bsel_2742
PFAM: domain of unknown function DUF1731; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein, conserved; K07071.
  
    0.595
Bsel_1243
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.
  
     0.586
Bsel_1198
PFAM: iron-containing alcohol dehydrogenase; KEGG: gbm:Gbem_0781 iron-containing alcohol dehydrogenase.
  
    0.583
Bsel_0629
Hypothetical protein.
  
     0.582
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.