STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1587KEGG: geo:Geob_0734 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (229 aa)    
Predicted Functional Partners:
Bsel_0243
PFAM: protein of unknown function DUF214; KEGG: scl:sce1111 lipoprotein releasing system transmembrane protein LolC.
  
 
 0.769
Bsel_2652
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_2026 protein of unknown function DUF214.
  
 
 0.769
Bsel_0655
Cyclic nucleotide-binding protein; KEGG: ppabcb22; ATP-binding cassette transporter, subfamily B, member 22, group LLP protein PpABCB22; PFAM: ABC transporter related; cyclic nucleotide-binding; ABC transporter transmembrane region; SMART: AAA ATPase; cyclic nucleotide-binding.
 
     0.702
Bsel_2484
KEGG: mxa:MXAN_4750 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.698
Bsel_1894
KEGG: hac:Hac_1596 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.689
Bsel_0145
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.682
Bsel_1588
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ilo:IL0200 K+ uptake system component.
  
 
 0.536
cysS
TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gme:Gmet_0057 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.532
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
 
     0.513
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
 
   
 0.509
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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