STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1600PFAM: Cell-wall binding lipoprotein YkyA, putative; KEGG: viral A-type inclusion protein. (212 aa)    
Predicted Functional Partners:
Bsel_0391
Hypothetical protein.
  
     0.739
Bsel_1374
PFAM: SNARE associated Golgi protein; KEGG: lpc:LPC_2706 hypothetical protein.
  
     0.733
Bsel_2488
Hypothetical protein.
  
     0.713
Bsel_0516
Hypothetical protein; KEGG: antigen 332.
 
     0.705
Bsel_1773
KEGG: cla:Cla_1427 hypothetical protein.
  
     0.696
Bsel_2582
PFAM: GCN5-related N-acetyltransferase.
 
     0.692
Bsel_1258
Small secreted protein-like protein.
  
     0.687
Bsel_2770
KEGG: similar to centrosome protein cep290.
  
     0.687
Bsel_2171
Hypothetical protein; KEGG: sfu:Sfum_0568 PpiC-type peptidyl-prolyl cis-trans isomerase.
 
   
 0.679
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.672
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.