STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1607PFAM: Peptidase M23; KEGG: BRD group protein. (391 aa)    
Predicted Functional Partners:
Bsel_3300
PFAM: YycH family protein.
 
     0.708
Bsel_1606
PFAM: polysaccharide deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase, putative.
       0.705
Bsel_2239
KEGG: hypothetical protein.
 
     0.688
Bsel_2776
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nis:NIS_1814 ferredoxin-like protein.
  
     0.657
Bsel_0513
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hypothetical protein.
  
   
 0.627
Bsel_2248
Hypothetical protein.
  
     0.626
Bsel_1754
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: bbr:BB2580 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
   
   0.606
Bsel_2232
KEGG: maq:Maqu_1305 hypothetical protein.
  
     0.596
Bsel_2004
KEGG: msu:MS1994 anaerobic glycerol-3-phosphate dehydrogenase subunit B.
  
     0.593
Bsel_2510
Hypothetical protein.
  
     0.578
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.