STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctaACytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. (304 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
 0.996
Bsel_1624
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.896
Bsel_1523
PFAM: electron transport protein SCO1/SenC; KEGG: mxa:MXAN_7388 SCO1/SenC family protein.
 
 
 0.779
Bsel_1628
PFAM: protein of unknown function DUF420; KEGG: ank:AnaeK_0947 protein of unknown function DUF420.
 
    0.779
Bsel_1625
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.768
Bsel_1522
KEGG: vap:Vapar_0701 hypothetical protein; TIGRFAM: cytochrome c oxidase assembly factor CtaG; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related.
 
   
 0.735
Bsel_2113
Cytochrome b subunit of the bc complex-like protein; Component of the menaquinol-cytochrome c reductase complex.
 
  
 0.683
Bsel_2058
PFAM: protein of unknown function DUF420; KEGG: scl:sce6560 hypothetical protein.
 
    0.616
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.598
Bsel_1627
PFAM: cytochrome C oxidase subunit IV; KEGG: rme:Rmet_5790 cytochrome c oxidase subunit IV.
 
   
 0.567
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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