STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1905PFAM: Acetamidase/Formamidase; KEGG: dvm:DvMF_1872 acetamidase/formamidase. (434 aa)    
Predicted Functional Partners:
Bsel_2856
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hypothetical protein.
    
 0.910
Bsel_1304
Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit-like protein; KEGG: dvm:DvMF_1491 cytochrome c nitrite reductase small subunit.
   
 
  0.902
Bsel_1831
TIGRFAM: glutamine synthetase, type I; KEGG: dps:DP0930 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
    
 0.902
Bsel_0405
KEGG: bov:BOV_0218 putative glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
Bsel_1219
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bav:BAV3144 nformate dehydrogenase, iron-sulfur subunit.
     
  0.900
Bsel_1220
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bxe:Bxe_B2551 formate dehydrogenase gamma subunit.
     
  0.900
Bsel_1303
Nitrite reductase (cytochrome; KEGG: sat:SYN_02616 cytochrome c552; PFAM: cytochrome c552; Belongs to the cytochrome c-552 family.
     
  0.900
Bsel_1305
KEGG: dvm:DvMF_2385 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552; Belongs to the cytochrome c-552 family.
     
  0.900
Bsel_2036
KEGG: noc:Noc_0864 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
Bsel_2154
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: nme:NMB1476 glutamate dehydrogenase, NAD-specific; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.