STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (179 aa)    
Predicted Functional Partners:
msrB
TIGRFAM: methionine-R-sulfoxide reductase; KEGG: vco:VC0395_0557 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
 
 0.986
Bsel_1972
PFAM: beta-lactamase; KEGG: xca:xccb100_0239 beta-lactamase-like hydrolase.
       0.784
Bsel_1591
PFAM: glutaredoxin; KEGG: geo:Geob_3180 glutaredoxin.
  
 
 0.647
Bsel_1971
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.638
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.615
Bsel_1957
KEGG: geo:Geob_2372 ribonuclease H; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2.
  
  
 0.608
Bsel_2400
KEGG: bph:Bphy_5424 redoxin domain-containing protein.
   
 0.569
Bsel_2086
Hypothetical protein; KEGG: ajs:Ajs_1362 thioredoxin.
   
 0.548
Bsel_2572
TIGRFAM: redox-active disulfide protein 2; KEGG: gur:Gura_0436 redox-active disulfide protein 2.
   
 0.548
Bsel_1974
Peroxiredoxin, Ohr subfamily; KEGG: mlo:mll4282 organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein.
     
 0.483
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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