STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_1986PFAM: SNARE associated Golgi protein; KEGG: wsu:WS0198 hypothetical protein. (223 aa)    
Predicted Functional Partners:
Bsel_3277
PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_0759 putative ABC transporter solute-binding protein.
 
  
 0.692
Bsel_1987
PFAM: FAD dependent oxidoreductase; KEGG: mes:Meso_1828 FAD dependent oxidoreductase.
       0.588
Bsel_3273
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ftn:FTN_1525 phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.580
Bsel_3280
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: vpa:VP1198 putative reductase.
     0.555
Bsel_1883
PFAM: SNARE associated Golgi protein; KEGG: dps:DP1650 hypothetical protein.
  
     0.497
Bsel_0686
PFAM: protein of unknown function DUF1499; KEGG: dal:Dalk_4690 protein of unknown function DUF1499.
 
     0.432
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.