STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2014KEGG: scl:sce9074 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (300 aa)    
Predicted Functional Partners:
Bsel_2013
ABC-type Na+ efflux pump permease component-like protein; KEGG: hypothetical protein LOC100197724.
 
  
 0.989
Bsel_3216
KEGG: scl:sce3000 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
  
    0.558
Bsel_2015
Hypothetical protein.
       0.462
Bsel_2016
KEGG: lpp:lpp1137 hypothetical protein.
       0.462
Bsel_2017
PFAM: transcriptional regulator PadR family protein; KEGG: aci:ACIAD0154 putative transcriptional regulator.
       0.450
Bsel_1444
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: glo:Glov_2160 peptidase A24A domain protein.
      
 0.423
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.