STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2016KEGG: lpp:lpp1137 hypothetical protein. (310 aa)    
Predicted Functional Partners:
Bsel_2015
Hypothetical protein.
       0.780
Bsel_2017
PFAM: transcriptional regulator PadR family protein; KEGG: aci:ACIAD0154 putative transcriptional regulator.
       0.532
Bsel_2018
Hypothetical protein.
       0.532
Bsel_0096
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfo:Pfl01_0184 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.482
Bsel_0215
KEGG: mxa:MXAN_4309 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein.
  
 
 0.482
Bsel_0319
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: afw:Anae109_0489 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.482
Bsel_0370
KEGG: ank:AnaeK_2178 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-W factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein.
  
 
 0.482
Bsel_0402
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: bbt:BBta_3011 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.482
Bsel_0515
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.482
Bsel_0647
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: sde:Sde_0297 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.482
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.