STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2017PFAM: transcriptional regulator PadR family protein; KEGG: aci:ACIAD0154 putative transcriptional regulator. (114 aa)    
Predicted Functional Partners:
Bsel_2018
Hypothetical protein.
       0.835
Bsel_2015
Hypothetical protein.
       0.532
Bsel_2016
KEGG: lpp:lpp1137 hypothetical protein.
       0.532
Bsel_2013
ABC-type Na+ efflux pump permease component-like protein; KEGG: hypothetical protein LOC100197724.
 
     0.527
Bsel_1521
Cof-like hydrolase; KEGG: ent:Ent638_0005 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.
   
    0.472
Bsel_2929
Cof-like hydrolase; KEGG: asa:ASA_3565 HAD superfamily hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase.
   
    0.472
Bsel_1373
PFAM: protein of unknown function DUF1294; KEGG: ret:RHE_CH01861 putative inner membrane protein.
  
    0.466
Bsel_2014
KEGG: scl:sce9074 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.450
Bsel_2702
Transcriptional regulator, MerR family; KEGG: mxa:MXAN_5120 transcriptional activator TipA; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
   
 0.438
Bsel_0602
KEGG: bph:Bphy_3760 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component.
   
    0.404
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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