STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (138 aa)    
Predicted Functional Partners:
Bsel_2106
PFAM: LmbE family protein; KEGG: hypothetical protein.
  
  
 0.944
Bsel_2104
PFAM: Polynucleotide adenylyltransferase region; KEGG: sat:SYN_01518 poly A polymerase.
  
  
 0.941
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.940
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.935
Bsel_1577
KEGG: prostaglandin f2-alpha synthase; PFAM: aldo/keto reductase.
     
 0.912
Bsel_2109
PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: fph:Fphi_0361 pyrophosphatase.
  
  
 0.900
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
    0.867
Bsel_2105
PFAM: glycosyl transferase group 1; KEGG: hypothetical protein.
  
  
 0.827
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.816
Bsel_2398
CBS domain containing protein; KEGG: sfu:Sfum_0679 polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; Polynucleotide adenylyltransferase region; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.725
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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