STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2117PFAM: Protein of unknown function UPF0302; conserved hypothetical protein; Belongs to the UPF0302 family. (183 aa)    
Predicted Functional Partners:
Bsel_2116
Hypothetical protein.
 
     0.688
Bsel_2310
PFAM: Rhomboid family protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: dar:Daro_2385 rhomboid-like protein; SMART: Tetratricopeptide repeat.
 
    0.650
Bsel_1270
KEGG: hypothetical protein.
  
  
 0.645
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
 
    0.632
Bsel_2316
Hypothetical protein.
  
     0.622
Bsel_2432
PFAM: protein of unknown function DUF1510; KEGG: TSPYL2; TSPY-like 2; K11285 TSPY-like 2.
  
     0.614
Bsel_2097
Conserved hypothetical protein.
 
     0.608
Bsel_3299
PFAM: Protein of unknown function YycH.
  
     0.588
Bsel_1471
PFAM: protein of unknown function DUF1516.
  
     0.582
Bsel_1386
PFAM: Colicin V production protein; KEGG: gur:Gura_4049 colicin V production protein.
  
     0.578
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.