STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2149PFAM: type IV pilus assembly PilZ; KEGG: nmu:Nmul_A1606 YcgR. (220 aa)    
Predicted Functional Partners:
Bsel_0425
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; TIGRFAM: PAS sensor protein; KEGG: dma:DMR_11050 putative chemotaxis CheB/CheR fusion protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase.
  
  
 0.938
Bsel_1897
KEGG: dma:DMR_26640 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver.
  
  
 0.795
Bsel_1026
PFAM: FlgN family protein.
 
  
 0.792
Bsel_1752
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.787
Bsel_1756
PFAM: flagellar biosynthesis protein FliO; KEGG: sat:SYN_03207 flagellar biosynthetic protein.
 
    0.771
Bsel_1027
KEGG: dde:Dde_3152 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.764
Bsel_1025
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: gur:Gura_3121 hypothetical protein.
 
  
 0.733
Bsel_2345
Hypothetical protein.
  
     0.733
Bsel_1754
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: bbr:BB2580 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
 
  
 0.713
cmk
KEGG: pmu:PM0802 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
  
    0.702
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.