STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2163PFAM: Abortive infection protein; KEGG: vha:VIBHAR_06754 hypothetical protein. (197 aa)    
Predicted Functional Partners:
Bsel_2165
KEGG: hypothetical protein.
 
     0.836
Bsel_2164
TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein.
  
    0.793
Bsel_2162
Hypothetical protein.
       0.773
Bsel_2475
Hypothetical protein.
  
     0.690
Bsel_2183
Hypothetical protein.
  
     0.653
Bsel_1471
PFAM: protein of unknown function DUF1516.
  
     0.650
Bsel_2140
Hypothetical protein.
 
     0.642
Bsel_0295
PFAM: Cell wall-active antibiotics response protein; KEGG: xcb:XC_1549 hypothetical protein.
  
     0.636
Bsel_1335
Hypothetical protein.
  
     0.585
Bsel_1746
KEGG: hypothetical protein LOC100150943.
  
     0.577
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.