STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2165KEGG: hypothetical protein. (343 aa)    
Predicted Functional Partners:
Bsel_2164
TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein.
  
  
 0.915
Bsel_2163
PFAM: Abortive infection protein; KEGG: vha:VIBHAR_06754 hypothetical protein.
 
     0.836
Bsel_2162
Hypothetical protein.
       0.773
Bsel_2432
PFAM: protein of unknown function DUF1510; KEGG: TSPYL2; TSPY-like 2; K11285 TSPY-like 2.
  
     0.688
Bsel_1258
Small secreted protein-like protein.
  
     0.667
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
 
     0.645
Bsel_1326
PFAM: Septation ring formation regulator EzrA; KEGG: viral A-type inclusion protein.
  
     0.623
Bsel_2166
KEGG: gme:Gmet_3492 ferredoxin family protein, putative.
 
     0.618
Bsel_1333
PFAM: N-6 DNA methylase; KEGG: bpt:Bpet3991 type I restriction modification enzyme M subunit.
  
     0.617
Bsel_1226
Nucleoside triphosphatase YtkD; KEGG: glo:Glov_2686 NUDIX hydrolase; TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.608
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.