STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2166KEGG: gme:Gmet_3492 ferredoxin family protein, putative. (82 aa)    
Predicted Functional Partners:
Bsel_2165
KEGG: hypothetical protein.
 
     0.618
Bsel_2112
PFAM: protein of unknown function DUF1405.
 
     0.568
Bsel_2163
PFAM: Abortive infection protein; KEGG: vha:VIBHAR_06754 hypothetical protein.
       0.557
Bsel_1821
PFAM: protein of unknown function DUF1333; Belongs to the UPF0342 family.
  
     0.551
Bsel_2164
TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein.
       0.523
Bsel_1632
PFAM: protein of unknown function DUF1333; KEGG: GM19576 gene product from transcript GM19576-RA; Belongs to the UPF0342 family.
  
     0.508
Bsel_2162
Hypothetical protein.
       0.490
Bsel_2766
PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_2391 hypothetical protein.
  
   
 0.460
Bsel_1899
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nam:NAMH_0242 pyruvate synthase subunit PorA.
     
 0.437
Bsel_1816
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.436
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.