STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2172KEGG: mei:Msip34_2147 ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (184 aa)    
Predicted Functional Partners:
Bsel_0486
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.658
Bsel_1422
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
  
 0.587
Bsel_2245
methylmalonyl-CoA epimerase; KEGG: scl:sce1655 putative isobutyryl-CoA mutase, chain B; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: cobalamin B12-binding domain protein; Glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.563
Bsel_2173
Molybdenum cofactor synthesis domain protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.546
Bsel_2246
TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: gme:Gmet_3251 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase.
 
     0.489
Bsel_1978
PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0591 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.477
Bsel_3187
KEGG: sfu:Sfum_0456 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein.
 
     0.470
Bsel_2900
Protein of unknown function DUF105; KEGG: sat:SYN_01426 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: protein of unknown function DUF105; ABC transporter related; SMART: AAA ATPase.
  
    0.456
Bsel_3111
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.452
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
   
 0.401
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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