STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2242KEGG: rlt:Rleg2_4899 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (175 aa)    
Predicted Functional Partners:
Bsel_2243
KEGG: geo:Geob_2000 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein.
     
 0.790
Bsel_2559
Hypothetical protein.
  
     0.696
Bsel_1888
Hypothetical protein.
  
     0.673
Bsel_2323
PFAM: protein of unknown function DUF1189; KEGG: tau:Tola_2509 hypothetical protein.
  
     0.647
Bsel_1414
Hypothetical protein.
 
  
 0.639
Bsel_3183
PFAM: Protein of unknown function DUF2529.
  
     0.631
Bsel_1036
Hypothetical protein.
  
     0.626
Bsel_0965
PFAM: Protein of unknown function DUF1980; KEGG: dal:Dalk_1553 membrane protein-like protein.
  
     0.613
Bsel_2244
PFAM: carboxyl transferase; KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit.
  
    0.584
Bsel_2248
Hypothetical protein.
 
     0.584
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.