STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2249PFAM: protein of unknown function DUF1094; Belongs to the UPF0403 family. (137 aa)    
Predicted Functional Partners:
bshC
Protein of unknown function UCP012535; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.799
Bsel_2153
PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: flavin-containing monooxygenase family protein / FMO family protein.
  
  
 0.784
Bsel_2105
PFAM: glycosyl transferase group 1; KEGG: hypothetical protein.
  
     0.766
Bsel_1271
Hypothetical protein.
  
   
 0.750
Bsel_2106
PFAM: LmbE family protein; KEGG: hypothetical protein.
  
   
 0.666
Bsel_2248
Hypothetical protein.
       0.557
Bsel_2250
PFAM: periplasmic solute binding protein; KEGG: hsm:HSM_0813 high-affinity zinc transporter periplasmic component.
       0.537
Bsel_3214
PFAM: Protein of unknown function YwhD.
  
     0.499
Bsel_2013
ABC-type Na+ efflux pump permease component-like protein; KEGG: hypothetical protein LOC100197724.
  
     0.406
Bsel_2083
KEGG: dma:DMR_33470 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein.
 
     0.402
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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