STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2250PFAM: periplasmic solute binding protein; KEGG: hsm:HSM_0813 high-affinity zinc transporter periplasmic component. (407 aa)    
Predicted Functional Partners:
Bsel_2331
ABC transporter related protein; KEGG: sat:SYN_00955 ABC-type Mn/Zn transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.989
Bsel_2330
PFAM: ABC-3 protein; KEGG: sat:SYN_00956 ABC-type Mn2+/Zn2+ transport systems, permease component.
 
 
 0.983
Bsel_2329
PFAM: ABC-3 protein; KEGG: tdn:Suden_2063 hypothetical protein.
 
 
 0.981
Bsel_2336
KEGG: tcx:Tcr_2148 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.918
Bsel_2335
PFAM: ABC-3 protein; transport system permease protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
 
  
 0.908
Bsel_0257
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dvl:Dvul_0508 cobalamin synthesis protein, P47K.
  
  
 0.580
Bsel_0726
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: scl:sce8246 CobW/P47K family protein.
  
  
 0.580
rpmB
KEGG: dol:Dole_2056 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.555
Bsel_2249
PFAM: protein of unknown function DUF1094; Belongs to the UPF0403 family.
       0.537
Bsel_2253
KEGG: ade:Adeh_1827 3-methyl-2-oxobutanoate dehydrogenase (lipoamide); PFAM: dehydrogenase E1 component.
  
  
 0.536
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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