STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2265Hypothetical protein; KEGG: dda:Dd703_2263 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD. (204 aa)    
Predicted Functional Partners:
dxs
Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
      0.926
Bsel_2263
TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gur:Gura_2037 hemolysin A; SMART: RNA-binding S4 domain protein.
     
 0.865
Bsel_0137
Hypothetical protein.
  
     0.754
Bsel_0108
Hypothetical protein; Belongs to the eukaryotic ribosomal protein eL8 family.
  
     0.719
argR
Arginine repressor, ArgR; Regulates arginine biosynthesis genes.
  
  
 0.632
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.568
Bsel_2261
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.543
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.510
Bsel_0531
Putative transcriptional regulator, CopG family.
  
     0.506
Bsel_1641
PFAM: GCN5-related N-acetyltransferase; KEGG: vha:VIBHAR_05633 hypothetical protein.
 
 
   0.436
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.