STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2282KEGG: smt:Smal_2940 hypothetical protein. (376 aa)    
Predicted Functional Partners:
Bsel_0295
PFAM: Cell wall-active antibiotics response protein; KEGG: xcb:XC_1549 hypothetical protein.
 
  
 0.688
Bsel_1430
PFAM: Cell wall-active antibiotics response protein.
 
  
 0.562
Bsel_1088
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator.
  
  
 0.537
mntR
Iron (metal) dependent repressor, DtxR family; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
       0.529
Bsel_2936
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal.
  
     0.446
Bsel_0255
PFAM: MMPL domain protein; KEGG: hypothetical protein.
  
  
 0.435
Bsel_0980
PFAM: Acetyl xylan esterase; KEGG: hypothetical protein.
  
     0.434
Bsel_1089
PFAM: membrane protein of unknown function; KEGG: dia:Dtpsy_3382 membrane protein of unknown function.
  
  
 0.425
Bsel_2283
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.418
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.