STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2293PFAM: Type II secretion system F domain; KEGG: maq:Maqu_1350 general secretion pathway protein F. (341 aa)    
Predicted Functional Partners:
Bsel_2294
PFAM: type II secretion system protein E; KEGG: dat:HRM2_11300 GspE1.
 
 
 0.991
Bsel_1439
KEGG: mxa:MXAN_2513 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
 
 
 0.955
Bsel_2292
Competence protein ComGC-like protein; Required for transformation and DNA binding.
  
  
 0.882
Bsel_1444
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: glo:Glov_2160 peptidase A24A domain protein.
 
  
 0.877
Bsel_2289
Hypothetical protein.
  
  
 0.868
Bsel_1440
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: vvy:VV2874 twitching motility protein PilT; SMART: AAA ATPase.
 
  
 0.823
Bsel_3048
Hypothetical protein; KEGG: net:Neut_0515 type II secretion system protein G.
  
  
 0.781
Bsel_2376
KEGG: glo:Glov_1759 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein.
 
  
 0.753
Bsel_2377
TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: cvi:CV_3831 DNA transport competence protein; SMART: Helix-hairpin-helix DNA-binding class 1.
  
  
 0.681
Bsel_1443
KEGG: dol:Dole_1410 hypothetical protein.
 
  
 0.634
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.