STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2394PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_2906 FAD linked oxidase domain protein. (470 aa)    
Predicted Functional Partners:
Bsel_2393
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1624 glycolate oxidase iron-sulfur subunit, putative.
 
 0.998
Bsel_2003
KEGG: vvy:VVA0521 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 0.974
Bsel_1172
Glyoxylate reductase; KEGG: hypothetical protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region.
 
 
 0.948
Bsel_1569
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA.
  
 
 0.934
Bsel_0457
KEGG: scl:sce5154 KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
   
 
 0.919
Bsel_1570
Isocitrate lyase; KEGG: acp:A2cp1_3198 malate synthase A; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase.
     
 0.915
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.748
Bsel_1192
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: glo:Glov_0571 electron transfer flavoprotein alpha subunit.
 
 
 0.724
Bsel_3280
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: vpa:VP1198 putative reductase.
  
  
 0.702
Bsel_2134
KEGG: gur:Gura_4282 prenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.674
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.