STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2409Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rme:Rmet_0591 putative sensor protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein. (855 aa)    
Predicted Functional Partners:
Bsel_2801
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pin:Ping_0949 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
 
 0.883
Bsel_2648
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.844
Bsel_1897
KEGG: dma:DMR_26640 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver.
  
 
 0.836
Bsel_1369
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1560 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
 
 0.823
Bsel_2670
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: hha:Hhal_1446 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.818
Bsel_2027
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 
0.776
Bsel_3127
KEGG: pae:PA3974 LadS; PFAM: response regulator receiver; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
   
 
 0.759
Bsel_0618
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pmy:Pmen_0723 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver.
 
 
 
 0.746
Bsel_1323
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: ank:AnaeK_2797 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
 0.710
Bsel_0880
KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 
 0.708
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.