STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2500Hypothetical protein. (73 aa)    
Predicted Functional Partners:
Bsel_2501
Putative transcriptional regulator, PucR family; KEGG: tau:Tola_2578 transcriptional regulator, CdaR.
       0.755
Bsel_2499
PFAM: protein of unknown function DUF445; KEGG: pca:Pcar_0273 hypothetical protein.
       0.592
Bsel_2502
ABC transporter related protein; KEGG: ecr:ECIAI1_1343 putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
       0.508
Bsel_2498
PFAM: protein of unknown function DUF964; KEGG: hypothetical protein; Belongs to the UPF0342 family.
       0.435
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.