STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2602degV family protein; KEGG: lpf:lpl0258 hypothetical protein; TIGRFAM: degV family protein; PFAM: DegV family protein; Dak phosphatase. (598 aa)    
Predicted Functional Partners:
Bsel_2603
PFAM: protein of unknown function DUF1295; KEGG: ppd:Ppro_0131 hypothetical protein.
 
    0.824
Bsel_1701
PFAM: protein of unknown function DUF322.
 
  
 0.794
Bsel_1020
KEGG: dvl:Dvul_1226 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
 
  
0.575
Bsel_2065
degV family protein; KEGG: dvu:DVU1942 DAK2 and DegV domain-containing protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
 
  
0.572
Bsel_2412
KEGG: dde:Dde_1644 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
 
  
0.569
Bsel_1703
KEGG: dvl:Dvul_1226 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
 
  
0.563
Bsel_2271
PFAM: protein of unknown function DUF322.
  
  
 0.407
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.