STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2618PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_1732 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1019 aa)    
Predicted Functional Partners:
Bsel_1190
Hypothetical protein.
  
 
 0.647
Bsel_2466
KEGG: dat:HRM2_27220 putative preprotein translocase, subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein.
  
 
 
 0.581
Bsel_2619
Hypothetical protein.
       0.485
Bsel_2617
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_1785 3-ketoacyl-(acyl-carrier-protein) reductase.
     
 0.424
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.