STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2682PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: similar to stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein); K09553 stress-induced-phosphoprotein 1. (334 aa)    
Predicted Functional Partners:
Bsel_1309
PFAM: cytochrome c assembly protein; KEGG: scl:sce8173 cytochrome c-type biogenesis protein.
  
 
 0.793
Bsel_1310
Hypothetical protein; Possible subunit of a heme lyase.
  
  
 0.634
Bsel_2683
PFAM: peptidase M42 family protein; peptidase M20; KEGG: vsa:VSAL_II0101 peptidase.
       0.577
Bsel_2681
Hypothetical protein.
       0.551
Bsel_2400
KEGG: bph:Bphy_5424 redoxin domain-containing protein.
  
  
 0.456
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
    0.450
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
    0.450
Bsel_2680
KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB.
  
    0.409
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.