STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2684PFAM: Uncharacterised conserved protein UCP037246. (68 aa)    
Predicted Functional Partners:
Bsel_2685
KEGG: dol:Dole_1254 hypothetical protein.
       0.738
Bsel_0748
PFAM: protein of unknown function DUF948.
   
    0.487
Bsel_1269
PFAM: protein of unknown function DUF948; KEGG: gme:Gmet_2781 hypothetical protein.
   
    0.487
Bsel_2686
Hypothetical protein.
       0.482
Bsel_2687
KEGG: afw:Anae109_0681 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.482
Bsel_2688
Hypothetical protein; KEGG: cps:CPS_4735 copper ABC transporter, permease protein.
       0.482
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.