STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2737A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (362 aa)    
Predicted Functional Partners:
sfsA
KEGG: dat:HRM2_40650 SfsA; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.
 
    0.891
Bsel_1318
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; KEGG: hac:Hac_0003 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.
 
  
 0.888
Bsel_2736
PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ank:AnaeK_2852 short-chain dehydrogenase/reductase SDR.
  
    0.719
Bsel_2735
Gamma-glutamyltransferase; KEGG: pfs:PFLU4096 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
       0.637
Bsel_2738
PFAM: membrane-bound metal-dependent hydrolase; KEGG: mxa:MXAN_5486 putative hydrolase.
       0.608
Bsel_0002
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 
 0.564
Bsel_2733
PFAM: Chromate transporter; KEGG: csa:Csal_1741 chromate transporter.
       0.546
Bsel_2734
PFAM: Chromate transporter; KEGG: csa:Csal_1742 chromate transporter.
       0.544
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.534
Bsel_2371
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.493
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.