STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2744Transcriptional regulator, GntR family; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: cvi:CV_3302 transcriptional repressor of the trehalose operon; SMART: regulatory protein GntR HTH. (239 aa)    
Predicted Functional Partners:
Bsel_2511
KEGG: pfl:PFL_4934 PTS system, trehalose-specific IIBC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.810
Bsel_2745
TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: aha:AHA_3823 alpha,alpha-phosphotrehalase; SMART: alpha amylase catalytic sub domain.
 
  
 0.802
Bsel_0505
KEGG: asa:ASA_2992 PTS system, sucrose-specific IIBC component; TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.769
Bsel_2169
Regulatory protein GntR HTH; KEGG: aci:ACIAD0132 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
    0.625
Bsel_1074
PTS system, glucose-specific IIBC subunit; KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.609
Bsel_1346
KEGG: vap:Vapar_5148 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
    0.577
Bsel_2966
KEGG: mpt:Mpe_A2373 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.534
Bsel_3205
KEGG: bph:Bphy_4506 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.534
Bsel_3239
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
    0.498
Bsel_2746
PFAM: Auxin Efflux Carrier; KEGG: tau:Tola_2495 auxin efflux carrier.
       0.468
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.