STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2760PFAM: Phosphoglycerate mutase; KEGG: Putative protein of unknown function with some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene. (217 aa)    
Predicted Functional Partners:
Bsel_2759
RNA methyltransferase, TrmA family; KEGG: aha:AHA_3694 23S rRNA (uracil-5-)-methyltransferase RumA; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
     0.756
Bsel_2907
PFAM: Phosphoglycerate mutase; KEGG: ecc:c0729 alpha-ribazole-5'-phosphate phosphatase.
 
     0.598
Bsel_2723
KEGG: gme:Gmet_0147 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
     
 0.499
Bsel_2341
PFAM: protein of unknown function DUF34; KEGG: gsu:GSU3085 hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
  
 0.459
Bsel_1520
PFAM: GCN5-related N-acetyltransferase; KEGG: similar to N-acetyltransferase 8B.
  
    0.455
Bsel_2492
Integral membrane sensor signal transduction histidine kinase; KEGG: abo:ABO_0713 sensor histidine kinase RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
  
 0.449
Bsel_0513
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hypothetical protein.
  
     0.427
Bsel_2559
Hypothetical protein.
  
     0.417
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.