STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2788PFAM: glycosyl transferase family 2; KEGG: gem:GM21_1665 glycosyl transferase family 2. (374 aa)    
Predicted Functional Partners:
Bsel_2789
KEGG: abb:ABBFA_000876 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118.
  
    0.634
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
  
 
 0.607
Bsel_2210
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mxa:MXAN_0902 acyltransferase domain-containing protein.
 
  
 0.580
Bsel_2787
Thioredoxin; KEGG: nis:NIS_1241 thioredoxin.
  
    0.539
Bsel_2730
PFAM: glycosyl transferase family 2; chitin synthase; KEGG: mlo:mlr6694 hypothetical protein.
  
     0.514
Bsel_2027
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
  
  
 0.485
Bsel_2209
Membrane protein-like protein; KEGG: gsu:GSU1898 hypothetical protein.
 
     0.466
Bsel_2034
PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein; K09835 carotenoid isomerase.
 
     0.465
Bsel_1606
PFAM: polysaccharide deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase, putative.
 
  
 0.464
Bsel_2444
KEGG: cbg:CbuG_1449 tetratricopeptide repeat family protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat.
  
 
 0.450
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.