STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2803KEGG: scl:sce5645 carbohydrate ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (610 aa)    
Predicted Functional Partners:
Bsel_2804
KEGG: scl:sce5644 carbohydrate ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
   
0.842
Bsel_2805
TIGRFAM: glycerate kinase; KEGG: ent:Ent638_3566 glycerate kinase I; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.598
Bsel_3206
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pca:Pcar_0906 putative ATP-binding component of dipeptide transport system; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    
0.503
ade
TIGRFAM: adenine deaminase; KEGG: dvl:Dvul_2495 adenine deaminase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.487
Bsel_2580
KEGG: shw:Sputw3181_0916 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
     
0.468
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.454
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.