STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2821PFAM: periplasmic binding protein; KEGG: bmc:BAbS19_II05320 periplasmic binding protein. (333 aa)    
Predicted Functional Partners:
Bsel_2818
PFAM: transport system permease protein; KEGG: asu:Asuc_1823 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.986
Bsel_2819
PFAM: transport system permease protein; KEGG: msu:MS0793 BtuC protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.986
Bsel_2820
KEGG: msu:MS0794 FepC protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.986
Bsel_2899
PFAM: transport system permease protein; KEGG: mlo:mll1150 permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.668
Bsel_2898
PFAM: periplasmic binding protein; KEGG: dol:Dole_2060 periplasmic binding protein.
  
  
 0.508
Bsel_2900
Protein of unknown function DUF105; KEGG: sat:SYN_01426 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: protein of unknown function DUF105; ABC transporter related; SMART: AAA ATPase.
 
  
 0.503
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.